Moist Almond Flour Pumpkin Muffins – Fall Perfect Breakfast
These incredibly moist almond flour pumpkin muffins are bursting with warm spices and autumn flavors that’ll make your kitchen smell like a cozy fall bakery. Just like our popular almond flour banana bread, these gluten-free gems prove that healthy baking doesn’t mean sacrificing taste.
Ready in just 25 minutes, they’re perfect for busy mornings when you want something special for the family.
What Are Almond Flour Pumpkin Muffins?
Ever wondered why we call these little golden treasures “muffins” when they taste more like cupcakes? These almond flour pumpkin muffins get their name from their tender, cake-like texture that’s achieved by swapping regular flour for protein-rich almond flour.
They say the way to a man’s heart is through his stomach, and these spiced beauties certainly prove that point! Ready to fall in love with your new favorite autumn treat?

Why You’ll Love This Almond Flour Pumpkin Muffins Recipe
Rich, Warm Flavors That Scream Fall
These muffins are packed with real pumpkin puree and a perfect blend of cinnamon, nutmeg, and ginger that creates an irresistible aroma. Each bite delivers that cozy autumn feeling you crave, with a tender crumb that melts in your mouth.
Budget-Friendly Homemade Goodness
Making these at home costs a fraction of what you’d pay at specialty bakeries. With simple pantry ingredients and one can of pumpkin puree making multiple batches, you’ll save money while treating your family to something special.
Protein-Packed and Naturally Gluten-Free
The almond flour base provides more protein than traditional wheat flour, keeping you satisfied longer. Similar to our almond flour chocolate chip cookies, these muffins prove that gluten-free baking can be absolutely delicious. Why not whip up a batch this weekend and taste the difference homemade makes?
How to Make Almond Flour Pumpkin Muffins
Quick Overview
These almond flour pumpkin muffins are surprisingly simple to make with just one bowl and basic mixing techniques. The combination of almond flour and pumpkin creates incredibly moist muffins with a rich, satisfying texture. The warm spice blend gives them that perfect fall flavor everyone loves.
Total Time: 25 minutes
- Prep Time: 10 minutes
- Bake Time: 15 minutes
- Yield: 12 standard muffins
Key Ingredients for Almond Flour Pumpkin Muffins
Dry Ingredients:
- 2 cups fine almond flour
- 1 teaspoon baking soda
- 1 teaspoon ground cinnamon
- 1/2 teaspoon ground nutmeg
- 1/4 teaspoon ground ginger
- 1/4 teaspoon ground cloves
- 1/2 teaspoon salt
Wet Ingredients:
- 1 cup pumpkin puree (not pumpkin pie filling)
- 1/3 cup pure maple syrup
- 2 large eggs, room temperature
- 1/4 cup melted coconut oil or butter
- 1 teaspoon vanilla extract
Optional Add-ins:
- 1/3 cup mini chocolate chips
- 1/4 cup chopped pecans or walnuts
- 2 tablespoons pumpkin seeds for topping

Step-by-Step Instructions
Prepare Your Kitchen
Preheat your oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners or grease with coconut oil. This prevents sticking and makes removal easy.
Mix the Dry Ingredients
In a large mixing bowl, whisk together almond flour, baking soda, cinnamon, nutmeg, ginger, cloves, and salt. Make sure there are no lumps in the almond flour by sifting if necessary.
Combine Wet Ingredients
In a separate bowl, whisk together pumpkin puree, maple syrup, eggs, melted coconut oil, and vanilla extract until smooth and well combined. The mixture should be uniform in color.
Create the Batter
Pour the wet ingredients into the dry ingredients. Gently fold together using a rubber spatula until just combined. Don’t overmix – a few small lumps are perfectly fine and will prevent tough muffins.
Add Optional Mix-ins
If using chocolate chips or nuts, gently fold them into the batter now. Reserve a few for sprinkling on top if desired.
Fill and Bake
Divide the batter evenly among the muffin cups, filling each about 2/3 full. Sprinkle tops with pumpkin seeds if using. Bake for 15-18 minutes, or until a toothpick inserted in the center comes out with just a few moist crumbs.
Cool and Enjoy
Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool completely. This prevents soggy bottoms and allows the flavors to develop fully.
What to Serve Almond Flour Pumpkin Muffins With
Morning Pairings:
- Hot coffee or chai tea latte
- Greek yogurt with honey
- Fresh apple slices with almond butter
Afternoon Treats:
- Vanilla or cinnamon ice cream
- Whipped cream cheese frosting
- Caramel sauce drizzle
Seasonal Beverages:
- Pumpkin spice latte
- Apple cider (hot or cold)
- Spiced herbal tea

Top Tips for Perfecting Almond Flour Pumpkin Muffins
Use Fine Almond Flour
Blanched, finely ground almond flour works best for tender muffins. Coarse almond meal can create a gritty texture that’s less appealing.
Don’t Overmix the Batter
Fold ingredients just until combined. Overmixing develops too much structure in the almond flour, leading to dense, tough muffins instead of light, fluffy ones.
Check for Doneness Properly
Almond flour muffins can look done on top while still being wet inside. Use a toothpick test – it should come out with a few moist crumbs, not wet batter.
Room Temperature Ingredients
Bring eggs to room temperature for better mixing and a more uniform batter. Cold eggs can cause the coconut oil to solidify in chunks.
Ingredient Substitutions
Replace maple syrup with honey (use slightly less) or coconut sugar. Coconut oil can be swapped for melted butter or neutral oil like avocado oil.
Storage for Best Texture
Store completely cooled muffins in an airtight container to maintain moisture. They actually taste better the next day as flavors meld together.
Storing and Reheating Tips
Room Temperature Storage: Keep muffins in an airtight container for up to 3 days at room temperature. Place a paper towel in the container to absorb excess moisture.
Refrigerator Storage: For longer freshness, refrigerate muffins for up to 1 week. Wrap individually in plastic wrap or store in a sealed container.
Freezing Instructions: Freeze muffins for up to 3 months. Wrap each muffin individually in plastic wrap, then place in a freezer bag. Label with the date for easy tracking.
Reheating Methods:
- Microwave: 15-20 seconds for room temperature muffins, 30-45 seconds for frozen
- Oven: 350°F for 5-7 minutes, wrapped in foil to prevent drying
- Toaster Oven: 3-4 minutes at 300°F for a slightly crispy exterior
Pro Tip: Brush reheated muffins with a little melted butter for extra richness and to restore moisture.
Nutrition Information
| Nutrient | Per Muffin |
|---|---|
| Calories | 185 |
| Total Fat | 14g |
| Saturated Fat | 3g |
| Carbohydrates | 12g |
| Fiber | 3g |
| Sugar | 8g |
| Protein | 6g |
| Sodium | 195mg |
| Vitamin A | 684% DV |
Nutritional values are approximate and may vary based on specific ingredients used.
Frequently Asked Questions
Can I use almond meal instead of almond flour?
Almond meal will work but creates a coarser texture. For best results, pulse almond meal in a food processor until finer, or sift before using.
Why are my muffins too dense?
Dense muffins usually result from overmixing the batter or using old baking soda. Check that your baking soda is fresh (replace every 6 months) and mix just until ingredients are combined.
Can I make these muffins dairy-free?
Yes! Use melted coconut oil instead of butter. The recipe is naturally dairy-free when using coconut oil as the fat source.
How do I know when the muffins are done?
Insert a toothpick in the center of a muffin. It should come out with a few moist crumbs but no wet batter. The tops should spring back when lightly touched.
Can I reduce the sugar content?
You can reduce the maple syrup to 1/4 cup, but the muffins will be less sweet and slightly less moist. Consider adding extra spices to compensate for flavor.
What’s the best way to measure almond flour?
Spoon almond flour into measuring cups and level off with a knife. Don’t pack it down. For most accurate results, weigh the flour (2 cups = about 200g).
Can I make mini muffins instead?
Absolutely! Use a mini muffin tin and reduce baking time to 8-12 minutes. You’ll get about 24 mini muffins from this recipe.
My muffins stuck to the liners – why?
This often happens with paper liners and almond flour. Try silicone liners or grease paper liners with coconut oil before filling.
Additional Helpful Information
Seasonal Variations:
- Winter: Add cranberries and orange zest for a festive twist
- Spring: Incorporate lemon zest and poppy seeds
- Summer: Try adding blueberries and a touch of lemon
Make-Ahead Tips: Prepare the dry ingredients up to 1 week ahead and store in an airtight container. Mix wet ingredients the night before and refrigerate. Combine and bake fresh in the morning.
Scaling the Recipe: This recipe doubles easily for larger batches. Use a kitchen scale for most accurate results when scaling up ingredients.
Troubleshooting Common Issues:
- Muffins too crumbly: Add an extra egg or 2 tablespoons of pumpkin puree
- Not sweet enough: Drizzle with maple syrup glaze or dust with powdered sugar
- Too spicy: Reduce spices by half and gradually add more to taste
Health Benefits: Almond flour provides vitamin E, magnesium, and healthy fats. Pumpkin adds beta-carotene, fiber, and potassium. These muffins offer sustained energy without the blood sugar spike of traditional wheat flour muffins.
Gift Ideas: Package cooled muffins in clear cellophane bags tied with autumn ribbons for perfect fall gifts. Include a copy of the recipe for friends who fall in love with them!
These almond flour pumpkin muffins prove that healthy baking doesn’t require sacrifice. With their tender crumb, warm spices, and naturally gluten-free nature, they’re destined to become your new fall favorite. The best part? They’re so simple that even beginning bakers can achieve bakery-quality results every time.
